weka.filters.unsupervised.attribute

## Class NumericCleaner

- java.lang.Object
- - weka.filters.Filter
  - - weka.filters.SimpleFilter
    - - weka.filters.SimpleStreamFilter
      - - weka.filters.unsupervised.attribute.NumericCleaner

- All Implemented Interfaces:
    java.io.Serializable, CapabilitiesHandler, CapabilitiesIgnorer, CommandlineRunnable, OptionHandler, RevisionHandler, WeightedAttributesHandler, WeightedInstancesHandler, StreamableFilter

      public class NumericCleaner
      extends SimpleStreamFilter
      implements WeightedAttributesHandler, WeightedInstancesHandler

  A filter that 'cleanses' the numeric data from values that are too small, too big or very close to a certain value, and sets these values to a pre-defined default.

  Valid options are:

       -output-debug-info
        Turns on output of debugging information.

       -min <double>
        The minimum threshold. (default -Double.MAX_VALUE)

       -min-default <double>
        The minimum threshold below which values are replaced by the corresponding default.
        (default -Double.MAX_VALUE)

       -max <double>
        The maximum threshold above which values are replaced by the corresponding default.
        (default Double.MAX_VALUE)

       -max-default <double>
        The replacement for values larger than the maximum threshold.
        (default Double.MAX_VALUE)

       -closeto <double>
        The value with respect to which closeness is determined. (default 0)

       -closeto-default <double>
        The replacement for values that are too close to '-closeto'.
        (default 0)

       -closeto-tolerance <double>
        The tolerance for testing whether a value is too close. (default 1E-6)

       -decimals <int>
        The number of decimals to round to, -1 means no rounding at all.
        (default -1)

       -R <col1,col2,...>
        The list of columns to cleanse, e.g., first-last or first-3,5-last.
        (default first-last)

       -V
        Inverts the matching sense.

       -include-class
        Whether to include the class in the cleansing.
        The class column will always be skipped if this flag is not
        present. (default no)

  Version:
    $Revision: 14534 $
  Author:
    fracpete (fracpete at waikato dot ac dot nz)
  See Also:
    Serialized Form

- - ### Constructor Summary

    Constructors
    Constructor and Description
    `NumericCleaner()`

  - ### Method Summary

    All Methods Static Methods Instance Methods Concrete Methods
    Modifier and Type | Method and Description
    --- | ---
    `java.lang.String` | `attributeIndicesTipText()` Returns the tip text for this property
    `java.lang.String` | `closeToDefaultTipText()` Returns the tip text for this property
    `java.lang.String` | `closeToTipText()` Returns the tip text for this property
    `java.lang.String` | `closeToToleranceTipText()` Returns the tip text for this property
    `java.lang.String` | `decimalsTipText()` Returns the tip text for this property
    `java.lang.String` | `getAttributeIndices()` Gets the selection of the columns, e.g., first-last or first-3,5-last
    `Capabilities` | `getCapabilities()` Returns the Capabilities of this filter.
    `double` | `getCloseTo()` Get the "close to" number.
    `double` | `getCloseToDefault()` Get the "close to" default.
    `double` | `getCloseToTolerance()` Get the "close to" Tolerance.
    `int` | `getDecimals()` Get the number of decimals to round to.
    `boolean` | `getIncludeClass()` Gets whether the class is included in the cleaning process or always skipped.
    `boolean` | `getInvertSelection()` Gets whether the selection of the columns is inverted
    `double` | `getMaxDefault()` Get the maximum default.
    `double` | `getMaxThreshold()` Get the maximum threshold.
    `double` | `getMinDefault()` Get the minimum default.
    `double` | `getMinThreshold()` Get the minimum threshold.
    `java.lang.String[]` | `getOptions()` Gets the current settings of the filter.
    `java.lang.String` | `getRevision()` Returns the revision string.
    `java.lang.String` | `globalInfo()` Returns a string describing this filter.
    `java.lang.String` | `includeClassTipText()` Returns the tip text for this property
    `java.lang.String` | `invertSelectionTipText()` Returns the tip text for this property
    `java.util.Enumeration<Option>` | `listOptions()` Returns an enumeration describing the available options.
    `static void` | `main(java.lang.String[] args)` Runs the filter from commandline, use "-h" to see all options.
    `java.lang.String` | `maxDefaultTipText()` Returns the tip text for this property
    `java.lang.String` | `maxThresholdTipText()` Returns the tip text for this property
    `java.lang.String` | `minDefaultTipText()` Returns the tip text for this property
    `java.lang.String` | `minThresholdTipText()` Returns the tip text for this property
    `void` | `setAttributeIndices(java.lang.String value)` Sets the columns to use, e.g., first-last or first-3,5-last
    `void` | `setCloseTo(double value)` Set the "close to" number.
    `void` | `setCloseToDefault(double value)` Set the "close to" default.
    `void` | `setCloseToTolerance(double value)` Set the "close to" Tolerance.
    `void` | `setDecimals(int value)` Set the number of decimals to round to.
    `void` | `setIncludeClass(boolean value)` Sets whether the class can be cleaned, too.
    `void` | `setInvertSelection(boolean value)` Sets whether the selection of the indices is inverted or not
    `void` | `setMaxDefault(double value)` Set the naximum default.
    `void` | `setMaxThreshold(double value)` Set the maximum threshold.
    `void` | `setMinDefault(double value)` Set the minimum default.
    `void` | `setMinThreshold(double value)` Set the minimum threshold.
    `void` | `setOptions(java.lang.String[] options)` Parses a given list of options.

    - ### Methods inherited from class weka.filters.SimpleStreamFilter

      `batchFinished, input`

    - ### Methods inherited from class weka.filters.SimpleFilter

      `setInputFormat`

    - ### Methods inherited from class weka.filters.Filter

      `batchFilterFile, debugTipText, doNotCheckCapabilitiesTipText, filterFile, getCapabilities, getCopyOfInputFormat, getDebug, getDoNotCheckCapabilities, getOutputFormat, isFirstBatchDone, isNewBatch, isOutputFormatDefined, makeCopies, makeCopy, mayRemoveInstanceAfterFirstBatchDone, numPendingOutput, output, outputPeek, postExecution, preExecution, run, runFilter, setDebug, setDoNotCheckCapabilities, toString, useFilter, wekaStaticWrapper`

    - ### Methods inherited from class java.lang.Object

      `equals, getClass, hashCode, notify, notifyAll, wait, wait, wait`

- - ### Constructor Detail

    - #### NumericCleaner

          public NumericCleaner()

  - ### Method Detail

    - #### globalInfo

          public java.lang.String globalInfo()

      Returns a string describing this filter.
      Specified by:
        `globalInfo` in class `SimpleFilter`
      Returns:
        a description of the filter suitable for displaying in the explorer/experimenter gui

    - #### listOptions

          public java.util.Enumeration<Option> listOptions()

      Returns an enumeration describing the available options.
      Specified by:
        `listOptions` in interface `OptionHandler`
      Overrides:
        `listOptions` in class `Filter`
      Returns:
        an enumeration of all the available options.

    - #### getOptions

          public java.lang.String[] getOptions()

      Gets the current settings of the filter.
      Specified by:
        `getOptions` in interface `OptionHandler`
      Overrides:
        `getOptions` in class `Filter`
      Returns:
        an array of strings suitable for passing to setOptions

    - #### setOptions

          public void setOptions(java.lang.String[] options)
                          throws java.lang.Exception

      Parses a given list of options.

      Valid options are:

           -output-debug-info
            Turns on output of debugging information.

           -min <double>
            The minimum threshold. (default -Double.MAX_VALUE)

           -min-default <double>
            The minimum threshold below which values are replaced by the corresponding default.
            (default -Double.MAX_VALUE)

           -max <double>
            The maximum threshold above which values are replaced by the corresponding default.
            (default Double.MAX_VALUE)

           -max-default <double>
            The replacement for values larger than the maximum threshold.
            (default Double.MAX_VALUE)

           -closeto <double>
            The value with respect to which closeness is determined. (default 0)

           -closeto-default <double>
            The replacement for values that are too close to '-closeto'.
            (default 0)

           -closeto-tolerance <double>
            The tolerance for testing whether a value is too close. (default 1E-6)

           -decimals <int>
            The number of decimals to round to, -1 means no rounding at all.
            (default -1)

           -R <col1,col2,...>
            The list of columns to cleanse, e.g., first-last or first-3,5-last.
            (default first-last)

           -V
            Inverts the matching sense.

           -include-class
            Whether to include the class in the cleansing.
            The class column will always be skipped if this flag is not
            present. (default no)

      Specified by:
        `setOptions` in interface `OptionHandler`
      Overrides:
        `setOptions` in class `Filter`
      Parameters:
        `options` - the list of options as an array of strings
      Throws:
        `java.lang.Exception` - if an option is not supported

    - #### getCapabilities

          public Capabilities getCapabilities()

      Returns the Capabilities of this filter.
      Specified by:
        `getCapabilities` in interface `CapabilitiesHandler`
      Overrides:
        `getCapabilities` in class `Filter`
      Returns:
        the capabilities of this object
      See Also:
        `Capabilities`

    - #### minThresholdTipText

          public java.lang.String minThresholdTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getMinThreshold

          public double getMinThreshold()

      Get the minimum threshold.
      Returns:
        the minimum threshold.

    - #### setMinThreshold

          public void setMinThreshold(double value)

      Set the minimum threshold.
      Parameters:
        `value` - the minimum threshold to use.

    - #### minDefaultTipText

          public java.lang.String minDefaultTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getMinDefault

          public double getMinDefault()

      Get the minimum default.
      Returns:
        the minimum default.

    - #### setMinDefault

          public void setMinDefault(double value)

      Set the minimum default.
      Parameters:
        `value` - the minimum default to use.

    - #### maxThresholdTipText

          public java.lang.String maxThresholdTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getMaxThreshold

          public double getMaxThreshold()

      Get the maximum threshold.
      Returns:
        the maximum threshold.

    - #### setMaxThreshold

          public void setMaxThreshold(double value)

      Set the maximum threshold.
      Parameters:
        `value` - the maximum threshold to use.

    - #### maxDefaultTipText

          public java.lang.String maxDefaultTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getMaxDefault

          public double getMaxDefault()

      Get the maximum default.
      Returns:
        the maximum default.

    - #### setMaxDefault

          public void setMaxDefault(double value)

      Set the naximum default.
      Parameters:
        `value` - the maximum default to use.

    - #### closeToTipText

          public java.lang.String closeToTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getCloseTo

          public double getCloseTo()

      Get the "close to" number.
      Returns:
        the "close to" number.

    - #### setCloseTo

          public void setCloseTo(double value)

      Set the "close to" number.
      Parameters:
        `value` - the number to use for checking closeness.

    - #### closeToDefaultTipText

          public java.lang.String closeToDefaultTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getCloseToDefault

          public double getCloseToDefault()

      Get the "close to" default.
      Returns:
        the "close to" default.

    - #### setCloseToDefault

          public void setCloseToDefault(double value)

      Set the "close to" default.
      Parameters:
        `value` - the "close to" default to use.

    - #### closeToToleranceTipText

          public java.lang.String closeToToleranceTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getCloseToTolerance

          public double getCloseToTolerance()

      Get the "close to" Tolerance.
      Returns:
        the "close to" Tolerance.

    - #### setCloseToTolerance

          public void setCloseToTolerance(double value)

      Set the "close to" Tolerance.
      Parameters:
        `value` - the "close to" Tolerance to use.

    - #### attributeIndicesTipText

          public java.lang.String attributeIndicesTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getAttributeIndices

          public java.lang.String getAttributeIndices()

      Gets the selection of the columns, e.g., first-last or first-3,5-last
      Returns:
        the selected indices

    - #### setAttributeIndices

          public void setAttributeIndices(java.lang.String value)

      Sets the columns to use, e.g., first-last or first-3,5-last
      Parameters:
        `value` - the columns to use

    - #### invertSelectionTipText

          public java.lang.String invertSelectionTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getInvertSelection

          public boolean getInvertSelection()

      Gets whether the selection of the columns is inverted
      Returns:
        true if the selection is inverted

    - #### setInvertSelection

          public void setInvertSelection(boolean value)

      Sets whether the selection of the indices is inverted or not
      Parameters:
        `value` - the new invert setting

    - #### includeClassTipText

          public java.lang.String includeClassTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getIncludeClass

          public boolean getIncludeClass()

      Gets whether the class is included in the cleaning process or always skipped.
      Returns:
        true if the class can be considered for cleaning.

    - #### setIncludeClass

          public void setIncludeClass(boolean value)

      Sets whether the class can be cleaned, too.
      Parameters:
        `value` - true if the class can be cleansed, too

    - #### decimalsTipText

          public java.lang.String decimalsTipText()

      Returns the tip text for this property
      Returns:
        tip text for this property suitable for displaying in the explorer/experimenter gui

    - #### getDecimals

          public int getDecimals()

      Get the number of decimals to round to.
      Returns:
        the number of decimals.

    - #### setDecimals

          public void setDecimals(int value)

      Set the number of decimals to round to.
      Parameters:
        `value` - the number of decimals.

    - #### getRevision

          public java.lang.String getRevision()

      Returns the revision string.
      Specified by:
        `getRevision` in interface `RevisionHandler`
      Overrides:
        `getRevision` in class `Filter`
      Returns:
        the revision

    - #### main

          public static void main(java.lang.String[] args)

      Runs the filter from commandline, use "-h" to see all options.
      Parameters:
        `args` - the commandline options for the filter